Quraishi MN*, Acharjee A*, Beggs AD, Horniblow R, Tselepis C, Gkoutus G et al., A pilot integrative analysis of colonic gene expression, gut microbiota and immune infiltration in primary sclerosing cholangitis-inflammatory bowel disease: association of disease with bile acid pathways; Journal of Crohn's and Colitis (2020); doi: 10.1093/ecco-jcc/jjaa021

Bravo-Merodio L*, Acharjee A*#, Hazeldine J, Bentley C, Foster M, Gkoutos GV#, Lord JM. Machine learning for the detection of early immunological markers as predictors of multi-organ dysfunction. Nature Scientific Data. (2019); 19;6(1):328. doi:10.1038/s41597-019-0337-6

Stapleton CJ*, Acharjee A*, Irvine HJ, Wolcott ZC, Patel AB, Kimberly WT. High-throughput metabolite profiling: identification of plasma taurine as a potential biomarker of functional outcome after aneurysmal subarachnoid hemorrhage. J Neurosurg. (2019), 22:1-8. doi: 10.3171/2019.9.JNS191346.

Sanders FWB, Acharjee A, Walker C, Marney L, Roberts LD et al., Hepatic steatosis risk is partly driven by increased de novo lipogenesis following carbohydrate consumption. Genome Biol. (2018) 20;19(1):79. doi: 10.1186/s13059-018-1439-8.

Murfitt SA, Zaccone P, Wang X, Acharjee A, Sawyer Y, Koulman A, Roberts LD,Cooke A, Griffin JL. Metabolomics and Lipidomics Study of Mouse Models of Type 1 Diabetes Highlights Divergent Metabolism in Purine and Tryptophan MetabolismPrior to Disease Onset. J Proteome Res. (2018) 2;17(3):946-960. doi:10.1021/acs.jproteome.7b00489.

Acharjee A, Prentice P, Acerini C, Smith J, Hughes IA, Ong K, Griffin JL, Dunger D, Koulman A. The translation of lipid profiles to nutritional biomarkers in the study of infant metabolism. Metabolomics. (2017);13(3):25.

Acharjee A, Kloosterman B, Visser RG, Maliepaard C. Integration of multi-omics data for prediction of phenotypic traits using random forest. BMC Bioinformatics. (2017), 6;17 Suppl 5:180. doi: 10.1186/s12859-016-1043-4.

Acharjee A, Ament Z, West JA, Stanley E, Griffin JL. Integration of metabolomics, lipidomics and clinical data using a machine learning method. BMC Bioinformatics. (2016), 22;17(Suppl 15):440.

Acharjee A, Finkers HJ, Visser RGF, Maliepaard CA, Comparison of Regularized Regression Methods for ~Omics Data, Metabolomics : Open Access 3(2013) - ISSN 2153-0769 - 9 p